Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004093annotation not available (1638 aa)    
Predicted Functional Partners:
COL4A6
Collagen type IV alpha 6 chain.
  
0.994
ITGA1
Integrin subunit alpha 1.
    
 0.955
LAMA2
Laminin subunit alpha 2.
    
 0.950
ITGB8
Integrin subunit beta 8.
    
 0.924
ENSSARP00000006345
annotation not available
  
  
 
0.906
ENSSARP00000005321
annotation not available
   
 
  0.843
ITGB5
Integrin subunit beta 5.
    
 0.791
ITGA4
Integrin subunit alpha 4.
    
 0.768
ITGA8
Integrin subunit alpha 8.
    
 0.763
COL10A1
Collagen type X alpha 1 chain.
    
  0.713
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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