Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5orf22Chromosome unknown open reading frame, human C5orf22. (438 aa)    
Predicted Functional Partners:
WBP11
WW domain binding protein 11.
    
 
 0.877
ELOF1
Elongation factor 1 homolog.
    
   0.840
C1orf109
Chromosome unknown open reading frame, human C1orf109.
   
    0.691
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.676
ACOT12
acyl-CoA thioesterase 12.
   
    0.676
RDH13
Retinol dehydrogenase 13.
   
    0.669
ENSSARP00000006750
annotation not available
   
   0.669
ENSSARP00000010518
annotation not available
   
    0.663
TRMT13
tRNA methyltransferase 13 homolog.
   
  
 0.632
CELSR2
Cadherin EGF LAG seven-pass G-type receptor 2.
   
 0.611
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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