Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARF1ADP ribosylation factor 1. (181 aa)    
Predicted Functional Partners:
PLD2
Phospholipase D2.
   
 0.952
ABI1
Abl interactor 1.
    
 0.924
COPB1
Coatomer protein complex subunit beta 1.
   
 0.918
LOC101558217
ADP-ribosylation factor 1-like.
  
  
 
0.900
ENSSARP00000011708
annotation not available
  
  
 
0.900
BBS7
Bardet-Biedl syndrome 7.
   
 0.895
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.883
ARFGAP2
ADP ribosylation factor GTPase activating protein 2.
    
 0.868
AP3B1
Adaptor related protein complex 3 subunit beta 1.
    
 0.856
BBS2
Bardet-Biedl syndrome 2.
    
 0.802
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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