Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004167annotation not available (484 aa)    
Predicted Functional Partners:
ENSSARP00000006823
annotation not available
    
 0.996
ENSSARP00000010954
annotation not available
   
 0.993
WDR78
WD repeat domain 78.
   
 0.990
WDR63
WD repeat domain 63.
   
 0.987
DNAH2
Dynein axonemal heavy chain 2.
    
 0.986
DNAH5
Dynein axonemal heavy chain 5.
   
 0.974
DNAH8
Dynein axonemal heavy chain 8.
   
 0.974
ENSSARP00000010228
annotation not available
   
 0.971
ENSSARP00000001376
annotation not available
   
 
 0.947
ENSSARP00000006674
annotation not available
   
 
 0.947
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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