Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004178annotation not available (4910 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.923
CLCA1
Chloride channel accessory 1.
   
 0.744
RPS15
Ribosomal protein S15.
   
 0.689
ENSSARP00000005839
annotation not available
   
  0.682
RPS7
Ribosomal protein S7.
   
 0.657
ENSSARP00000006343
annotation not available
   
  0.643
RPS23
Ribosomal protein S23.
   
  0.637
RPS16
Ribosomal protein S16.
   
  0.636
ENSSARP00000009767
annotation not available
   
  0.636
RPS8
Ribosomal protein S8.
    
  0.633
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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