Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004229annotation not available (168 aa)    
Predicted Functional Partners:
NCOA4
Nuclear receptor coactivator 4.
    
 
 0.652
ENSSARP00000003538
annotation not available
     
 0.608
RPL35
Ribosomal protein L35.
   
   0.525
ENSSARP00000008415
annotation not available
   
 
 0.509
PUM1
Pumilio RNA binding family member 1.
     
  0.490
PUM2
Pumilio RNA binding family member 2.
     
  0.490
ENSSARP00000003062
annotation not available
     
 0.464
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
     
 0.453
RNF7
Ring finger protein 7.
   
  
 0.452
TFRC
Transferrin receptor.
   
 0.434
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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