Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004233annotation not available (1294 aa)    
Predicted Functional Partners:
ENSSARP00000002620
annotation not available
 
     0.927
MVB12A
Multivesicular body subunit 12A.
    
   0.850
NUDCD1
NudC domain containing 1.
    
   0.832
LRIF1
Ligand dependent nuclear receptor interacting factor 1.
    
 
 0.787
PDS5A
PDS5 cohesin associated factor A.
   
  
 0.697
SCAF11
SR-related CTD associated factor 11.
   
    0.676
AHCTF1
AT-hook containing transcription factor 1.
   
    0.665
DMXL1
Dmx like 1.
   
    0.661
MACROH2A2
macroH2A.2 histone.
    
 
 0.644
METTL4
Methyltransferase like 4.
   
  
 0.636
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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