Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004286annotation not available (896 aa)    
Predicted Functional Partners:
SIN3A
SIN3 transcription regulator family member A.
   
 0.991
ARID4B
AT-rich interaction domain 4B.
    
 0.991
ENSSARP00000013068
annotation not available
   
 0.991
HDAC2
Histone deacetylase 2.
    
 0.979
HDAC1
Histone deacetylase 1.
    
 0.979
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.970
ING3
Inhibitor of growth family member 3.
    
 0.953
PHF12
PHD finger protein 12.
     
 0.945
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.943
ENSSARP00000006720
annotation not available
    
 0.937
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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