Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004359annotation not available (363 aa)    
Predicted Functional Partners:
ENSSARP00000007031
annotation not available
   
 0.711
B2M
Beta-2-microglobulin.
   
 0.711
HLA-DRA
HLA class II histocompatibility antigen, DR alpha chain.
   
 
 0.599
CD74
CD74 molecule.
   
 
  0.586
ENSSARP00000006123
annotation not available
    
  0.585
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 
 0.574
ENSSARP00000011891
annotation not available
    
  0.546
PDIA3
Protein disulfide isomerase family A member 3.
    
  0.540
CALR
Calreticulin.
    
  0.525
ENSSARP00000008711
annotation not available
   
 0.496
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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