Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPBP1L1GC-rich promoter binding protein 1 like 1. (474 aa)    
Predicted Functional Partners:
TMEM69
Transmembrane protein 69.
      
 0.683
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.636
ENSSARP00000005308
annotation not available
      
 0.566
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.526
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 
 0.481
RANBP10
RAN binding protein 10.
      
 0.472
ENSSARP00000009352
annotation not available
      
 0.472
EIF3E
Eukaryotic translation initiation factor 3 subunit E.
   
   0.458
HAT1
Histone acetyltransferase 1.
      
 0.435
NANOS3
Nanos C2HC-type zinc finger 3.
    
   0.421
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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