Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004433annotation not available (450 aa)    
Predicted Functional Partners:
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.773
MMP14
Matrix metallopeptidase 14.
    
  0.768
ENSSARP00000007169
annotation not available
    
 0.719
ENSSARP00000010436
annotation not available
    
 0.719
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.691
ENSSARP00000000648
annotation not available
    
  0.666
TNC
Tenascin C.
    
  0.666
TGFBR3
Transforming growth factor beta receptor 3.
    
 0.661
ENSSARP00000003948
annotation not available
  
 
0.646
ENSSARP00000010513
annotation not available
   
  0.644
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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