Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM254Transmembrane protein 254. (149 aa)    
Predicted Functional Partners:
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
  
 0.892
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
  
 0.888
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
  
 0.830
PWWP3B
PWWP domain containing 3B.
  
 0.825
ENSSARP00000003671
annotation not available
   
 0.824
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
  
 0.820
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
   
 0.817
NDUFS4
NADH:ubiquinone oxidoreductase subunit S4.
   
 0.816
OR10W1
Olfactory receptor 10W1-like.
   
 0.797
NDUFB6
NADH:ubiquinone oxidoreductase subunit B6.
   
 0.791
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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