STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC20Zinc finger DHHC-type containing 20. (323 aa)    
Predicted Functional Partners:
EEF1AKMT1
EEF1A lysine methyltransferase 1.
      
 0.832
ENSSARP00000011951
annotation not available
 
    
 0.768
RNF17
Ring finger protein 17.
      
 0.732
SKA1
Spindle and kinetochore associated complex subunit 1.
   
 0.722
SKA2
Spindle and kinetochore associated complex subunit 2.
   
 0.721
ATP12A
ATPase H+/K+ transporting non-gastric alpha2 subunit.
   
  
 0.708
ENSSARP00000006838
annotation not available
     
 0.660
LATS2
Large tumor suppressor kinase 2.
      
 0.605
ZMYM2
Zinc finger MYM-type containing 2.
      
 0.545
CLSPN
Claspin.
   
 
 0.538
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.