Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004475annotation not available (125 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.725
MACROH2A1
macroH2A.1 histone.
   
 0.707
MACROH2A2
macroH2A.2 histone.
   
 0.697
ENSSARP00000004100
annotation not available
    
 0.690
ENSSARP00000001853
annotation not available
   
 0.681
ENSSARP00000001909
annotation not available
   
 0.681
ENSSARP00000008074
annotation not available
   
 0.681
LOC101559105
Histone H4.
   
 0.681
H2AZ2
Histone H2A.V.
   
 0.678
KAT2B
Lysine acetyltransferase 2B.
    
 0.660
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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