ENSSARP00000004480 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000004480

annotation not available (50 aa)

Predicted Functional Partners:

ENSSARP00000001981

0.734

LOC101544994

0.734

CCL5

0.706

CXCL10

0.686

CCL21

0.683

ENSSARP00000010112

0.672

ENSSARP00000001249

0.656

ENSSARP00000000217

0.652

ENSSARP00000003676

0.637

CSF2

0.636

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCL21	CCL5	ENSSARP00000003619	ENSSARP00000003942	C-C motif chemokine ligand 21.	C-C motif chemokine ligand 5.	0.981
CCL21	CSF2	ENSSARP00000003619	ENSSARP00000007277	C-C motif chemokine ligand 21.	Colony stimulating factor 2.	0.435
CCL21	CXCL10	ENSSARP00000003619	ENSSARP00000011198	C-C motif chemokine ligand 21.	C-X-C motif chemokine ligand 10.	0.984
CCL21	ENSSARP00000000217	ENSSARP00000003619	ENSSARP00000000217	C-C motif chemokine ligand 21.	annotation not available	0.551
CCL21	ENSSARP00000001249	ENSSARP00000003619	ENSSARP00000001249	C-C motif chemokine ligand 21.	annotation not available	0.603
CCL21	ENSSARP00000001981	ENSSARP00000003619	ENSSARP00000001981	C-C motif chemokine ligand 21.	annotation not available	0.887
CCL21	ENSSARP00000004480	ENSSARP00000003619	ENSSARP00000004480	C-C motif chemokine ligand 21.	annotation not available	0.683
CCL21	ENSSARP00000010112	ENSSARP00000003619	ENSSARP00000010112	C-C motif chemokine ligand 21.	annotation not available	0.551
CCL21	LOC101544994	ENSSARP00000003619	ENSSARP00000005089	C-C motif chemokine ligand 21.	Growth-regulated protein homolog.	0.887
CCL5	CCL21	ENSSARP00000003942	ENSSARP00000003619	C-C motif chemokine ligand 5.	C-C motif chemokine ligand 21.	0.981
CCL5	CSF2	ENSSARP00000003942	ENSSARP00000007277	C-C motif chemokine ligand 5.	Colony stimulating factor 2.	0.697
CCL5	CXCL10	ENSSARP00000003942	ENSSARP00000011198	C-C motif chemokine ligand 5.	C-X-C motif chemokine ligand 10.	0.993
CCL5	ENSSARP00000000217	ENSSARP00000003942	ENSSARP00000000217	C-C motif chemokine ligand 5.	annotation not available	0.944
CCL5	ENSSARP00000001249	ENSSARP00000003942	ENSSARP00000001249	C-C motif chemokine ligand 5.	annotation not available	0.793
CCL5	ENSSARP00000001981	ENSSARP00000003942	ENSSARP00000001981	C-C motif chemokine ligand 5.	annotation not available	0.947
CCL5	ENSSARP00000003676	ENSSARP00000003942	ENSSARP00000003676	C-C motif chemokine ligand 5.	annotation not available	0.750
CCL5	ENSSARP00000004480	ENSSARP00000003942	ENSSARP00000004480	C-C motif chemokine ligand 5.	annotation not available	0.706
CCL5	ENSSARP00000010112	ENSSARP00000003942	ENSSARP00000010112	C-C motif chemokine ligand 5.	annotation not available	0.985
CCL5	LOC101544994	ENSSARP00000003942	ENSSARP00000005089	C-C motif chemokine ligand 5.	Growth-regulated protein homolog.	0.947
CSF2	CCL21	ENSSARP00000007277	ENSSARP00000003619	Colony stimulating factor 2.	C-C motif chemokine ligand 21.	0.435