Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004485annotation not available (646 aa)    
Predicted Functional Partners:
SPIRE1
Spire type actin nucleation factor 1.
    
 0.838
ENSSARP00000012065
annotation not available
 
      0.828
PFN4
Profilin family member 4.
    
 0.825
KMO
Kynurenine 3-monooxygenase.
    
 0.803
SPIRE2
Spire type actin nucleation factor 2.
    
 0.729
ENSSARP00000007708
annotation not available
    
 0.720
FYTTD1
Forty-two-three domain containing 1.
    
 0.692
ENSSARP00000002635
annotation not available
    
 0.685
ENSSARP00000003397
annotation not available
    
 
 0.678
RND1
Rho family GTPase 1.
    
 0.671
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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