Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004486annotation not available (400 aa)    
Predicted Functional Partners:
MRPS27
Mitochondrial ribosomal protein S27.
   
 
 0.954
ENSSARP00000003680
annotation not available
   
 
 0.949
MRPS15
Mitochondrial ribosomal protein S15.
   
 
 0.947
ENSSARP00000012028
annotation not available
   
   0.946
ENSSARP00000007439
annotation not available
   
   0.941
DAP3
Death associated protein 3.
   
 
 0.939
ENSSARP00000004064
annotation not available
   
   0.933
TFB1M
Transcription factor B1, mitochondrial.
  
 
 0.929
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
  
 
 0.927
MRPS7
Mitochondrial ribosomal protein S7.
   
 
 0.908
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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