STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCOLCE2Procollagen C-endopeptidase enhancer 2. (343 aa)    
Predicted Functional Partners:
TCN2
Transcobalamin 2.
    
 0.830
ENSSARP00000004228
annotation not available
    
 0.806
CBLIF
Cobalamin binding intrinsic factor.
    
 0.806
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.770
MST1R
Macrophage stimulating 1 receptor.
    
 0.770
COL1A2
Collagen type I alpha 2 chain.
   
 0.724
COL5A2
Collagen type V alpha 2 chain.
   
 0.722
COL3A1
Collagen type III alpha 1 chain.
   
 0.721
COL24A1
Collagen type XXIV alpha 1 chain.
    
 0.720
GC
GC vitamin D binding protein.
    
 0.714
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.