NEIL3 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

NEIL3

Nei like DNA glycosylase 3. (606 aa)

Predicted Functional Partners:

ENSSARP00000007618

0.818

COASY

0.801

ENSSARP00000011806

0.753

TRAIP

0.748

TOP2A

0.704

ENSSARP00000007543

0.683

TTK

0.677

ENSSARP00000004614

0.677

ENSSARP00000002969

0.668

ENSSARP00000009864

0.658

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COASY	NEIL3	ENSSARP00000012807	ENSSARP00000004535	Coenzyme A synthase.	Nei like DNA glycosylase 3.	0.801
ENSSARP00000002969	ENSSARP00000004614	ENSSARP00000002969	ENSSARP00000004614	annotation not available	annotation not available	0.999
ENSSARP00000002969	NEIL3	ENSSARP00000002969	ENSSARP00000004535	annotation not available	Nei like DNA glycosylase 3.	0.668
ENSSARP00000002969	TRAIP	ENSSARP00000002969	ENSSARP00000010131	annotation not available	TRAF interacting protein.	0.760
ENSSARP00000002969	TTK	ENSSARP00000002969	ENSSARP00000002107	annotation not available	TTK protein kinase.	0.469
ENSSARP00000004614	ENSSARP00000002969	ENSSARP00000004614	ENSSARP00000002969	annotation not available	annotation not available	0.999
ENSSARP00000004614	NEIL3	ENSSARP00000004614	ENSSARP00000004535	annotation not available	Nei like DNA glycosylase 3.	0.677
ENSSARP00000004614	TOP2A	ENSSARP00000004614	ENSSARP00000011180	annotation not available	DNA topoisomerase II alpha.	0.634
ENSSARP00000004614	TRAIP	ENSSARP00000004614	ENSSARP00000010131	annotation not available	TRAF interacting protein.	0.481
ENSSARP00000007543	NEIL3	ENSSARP00000007543	ENSSARP00000004535	annotation not available	Nei like DNA glycosylase 3.	0.683
ENSSARP00000007618	NEIL3	ENSSARP00000007618	ENSSARP00000004535	annotation not available	Nei like DNA glycosylase 3.	0.818
ENSSARP00000007618	TOP2A	ENSSARP00000007618	ENSSARP00000011180	annotation not available	DNA topoisomerase II alpha.	0.972
ENSSARP00000007618	TTK	ENSSARP00000007618	ENSSARP00000002107	annotation not available	TTK protein kinase.	0.967
ENSSARP00000009864	ENSSARP00000011806	ENSSARP00000009864	ENSSARP00000011806	annotation not available	annotation not available	0.645
ENSSARP00000009864	NEIL3	ENSSARP00000009864	ENSSARP00000004535	annotation not available	Nei like DNA glycosylase 3.	0.658
ENSSARP00000011806	ENSSARP00000009864	ENSSARP00000011806	ENSSARP00000009864	annotation not available	annotation not available	0.645
ENSSARP00000011806	NEIL3	ENSSARP00000011806	ENSSARP00000004535	annotation not available	Nei like DNA glycosylase 3.	0.753
NEIL3	COASY	ENSSARP00000004535	ENSSARP00000012807	Nei like DNA glycosylase 3.	Coenzyme A synthase.	0.801
NEIL3	ENSSARP00000002969	ENSSARP00000004535	ENSSARP00000002969	Nei like DNA glycosylase 3.	annotation not available	0.668
NEIL3	ENSSARP00000004614	ENSSARP00000004535	ENSSARP00000004614	Nei like DNA glycosylase 3.	annotation not available	0.677