STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004569annotation not available (583 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.988
IST1
IST1 factor associated with ESCRT-III.
    
 0.879
ENSSARP00000008064
annotation not available
   
 0.845
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.830
ENSSARP00000011921
annotation not available
    
 0.829
UBXN6
UBX domain protein 6.
    
 0.780
UBXN1
UBX domain protein 1.
    
 0.779
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.778
ENSSARP00000007047
annotation not available
   
 0.769
TEP1
Telomerase associated protein 1.
   
 0.769
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.