Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC12Tetratricopeptide repeat domain 12. (676 aa)    
Predicted Functional Partners:
PTGES3
Prostaglandin E synthase 3.
   
 0.968
CDC37L1
Cell division cycle 37 like 1.
   
 0.961
ENSSARP00000006823
annotation not available
  
 0.929
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 0.900
BAG3
BCL2 associated athanogene 3.
    
 0.899
ENSSARP00000000276
annotation not available
  
 0.887
ENSSARP00000003546
annotation not available
  
 0.887
TRAP1
TNF receptor associated protein 1.
  
 0.887
ENSSARP00000010937
annotation not available
  
 0.887
LOC101549247
dnaJ homolog subfamily A member 1-like.
  
 0.881
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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