Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C19orf25Chromosome 19 open reading frame 25. (97 aa)    
Predicted Functional Partners:
ENSSARP00000004378
annotation not available
    
 
 0.957
USE1
Unconventional SNARE in the ER 1.
    
   0.930
ZW10
Zw10 kinetochore protein.
    
 
 0.910
TDP2
tyrosyl-DNA phosphodiesterase 2.
    
   0.801
NBAS
NBAS subunit of NRZ tethering complex.
    
 
 0.766
SCFD1
Sec1 family domain containing 1.
    
 
 0.722
PAQR3
Progestin and adipoQ receptor family member 3.
      
 0.697
BAIAP2L1
BAR/IMD domain containing adaptor protein 2 like 1.
    
   0.623
VWA7
Von Willebrand factor A domain containing 7.
      
 0.617
SLC30A4
Solute carrier family 30 member 4.
    
   0.616
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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