Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTNTitin. (23455 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 0.975
MYL1
Myosin light chain 1.
   
 0.941
NEB
Nebulin.
   
 0.939
ACTN2
Actinin alpha 2.
   
 0.933
CUL7
Cullin 7.
    
 0.912
TRIM63
Tripartite motif containing 63.
   
 
 0.903
ENSSARP00000008551
annotation not available
   
 
 0.868
MYL4
Myosin light chain 4.
   
 0.858
CALM2
Calmodulin 2.
    
 0.847
TRIM55
Tripartite motif containing 55.
   
 
 0.830
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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