Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004698annotation not available (183 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.952
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
 0.951
ENSSARP00000000599
annotation not available
    
 0.937
ARL1
ADP-ribosylation factor-like protein 1.
   
 0.936
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.925
VPS52
VPS52 subunit of GARP complex.
    
 0.922
COG6
Component of oligomeric golgi complex 6.
   
 0.915
RAB1A
RAB1A, member RAS oncogene family.
   
 0.899
VPS53
VPS53 subunit of GARP complex.
    
 0.862
ENSSARP00000000270
annotation not available
    
 0.861
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.