Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAZ1BBromodomain adjacent to zinc finger domain 1B. (1355 aa)    
Predicted Functional Partners:
ENSSARP00000005018
annotation not available
   
 0.995
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.994
DEK
DEK proto-oncogene.
   
 0.993
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.979
ENSSARP00000010679
annotation not available
   
 0.959
SF3B1
Splicing factor 3b subunit 1.
   
 0.958
ENSSARP00000012692
annotation not available
    
 0.956
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.950
RSF1
Remodeling and spacing factor 1.
   
 0.946
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.943
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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