STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC49A4Solute carrier family 49 member 4. (332 aa)    
Predicted Functional Partners:
CCDC150
Coiled-coil domain containing 150.
      
 0.757
SLC15A2
Solute carrier family 15 member 2.
    
 
 0.581
SLC37A4
Solute carrier family 37 member 4.
      
 0.538
ARAP2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2.
      
 0.538
GAN
Gigaxonin.
      
 0.534
ENSSARP00000008030
annotation not available
      
 0.531
ACTR10
Actin related protein 10.
      
 0.531
TMEM147
Transmembrane protein 147.
      
 0.501
SLC44A4
Solute carrier family 44 member 4.
   
  
 0.485
ZMYND11
Zinc finger MYND-type containing 11.
      
 0.474
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.