STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf47Chromosome unknown open reading frame, human C6orf47. (296 aa)    
Predicted Functional Partners:
ENSSARP00000011864
annotation not available
      
 0.719
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.661
TFAP2D
Transcription factor AP-2 delta.
      
 0.540
ABHD16A
Abhydrolase domain containing 16A.
      
 0.540
ENSSARP00000006962
annotation not available
      
 0.536
PRRC2A
Proline rich coiled-coil 2A.
      
 0.536
ENSSARP00000012074
annotation not available
      
 0.457
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.455
APOM
Apolipoprotein M.
      
 0.449
CSNK2B
Casein kinase 2 beta.
      
 0.408
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.