Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPTBN1Spectrin beta, non-erythrocytic 1. (2309 aa)    
Predicted Functional Partners:
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 0.991
ENSSARP00000008881
annotation not available
   
  0.955
ENSSARP00000000698
annotation not available
   
 0.947
ENSSARP00000003278
annotation not available
     
 0.923
ENSSARP00000010116
annotation not available
   
 
  0.923
ADD2
Adducin 2.
    
 
 0.851
NF2
Neurofibromin 2.
    
 0.839
ANK1
Ankyrin 1.
   
 0.806
ANK3
Ankyrin 3.
   
 0.806
ENSSARP00000007619
annotation not available
   
 0.806
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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