STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LANCL1LanC like 1. (399 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain containing 4.
      
 0.758
ALDH16A1
Aldehyde dehydrogenase 16 family member A1.
    
 
 0.728
ERI3
ERI1 exoribonuclease family member 3.
      
 0.725
ENSSARP00000005090
annotation not available
      
 0.628
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.576
GPM6A
Glycoprotein M6A.
    
 
 0.562
RPS7
Ribosomal protein S7.
      
 0.560
PGM5
Phosphoglucomutase 5.
      
 0.553
OCIAD2
OCIA domain containing 2.
    
 
 0.544
ENSSARP00000005472
annotation not available
      
 0.539
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.