STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP5Secretory carrier membrane protein 5. (243 aa)    
Predicted Functional Partners:
CLK3
CDC like kinase 3.
 
    
 0.715
ENSSARP00000006085
annotation not available
      
 0.642
ADPGK
ADP dependent glucokinase.
      
 0.622
EFHC2
EF-hand domain containing 2.
      
 0.577
NEO1
Neogenin 1.
      
 0.570
RAB3C
RAB3C, member RAS oncogene family.
      
 0.568
MPI
Mannose phosphate isomerase.
      
 0.552
ENSSARP00000005472
annotation not available
   
  
 0.535
ITSN2
Intersectin 2.
    
 
 0.520
ENSSARP00000004117
annotation not available
      
 0.501
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.