STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000004845annotation not available (553 aa)    
Predicted Functional Partners:
COL22A1
Collagen type XXII alpha 1 chain.
  
 
0.957
COL4A6
Collagen type IV alpha 6 chain.
  
 
0.838
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.790
COL24A1
Collagen type XXIV alpha 1 chain.
  
  
0.745
COL8A1
Collagen type VIII alpha 1 chain.
    
0.731
COL25A1
Collagen type XXV alpha 1 chain.
  
  
0.704
COL1A2
Collagen type I alpha 2 chain.
    
0.702
COL5A2
Collagen type V alpha 2 chain.
  
 
0.690
ENSSARP00000005321
annotation not available
  
  
0.682
ITGBL1
Integrin subunit beta like 1.
    
 0.677
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.