STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNKCyclin K. (351 aa)    
Predicted Functional Partners:
CDK12
Cyclin dependent kinase 12.
    
 0.999
CDK13
Cyclin dependent kinase 13.
    
 0.998
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.977
ENSSARP00000005370
annotation not available
   
 0.972
CDC73
Cell division cycle 73.
   
 0.949
CCNH
Cyclin H.
     
 0.947
NELFE
Negative elongation factor complex member E.
    
 0.932
ENSSARP00000000943
annotation not available
    
 0.926
LHX1
LIM homeobox 1.
    
   0.923
CNOT2
CCR4-NOT transcription complex subunit 2.
   
   0.909
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.