ENSSARP00000004871 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000004871

annotation not available (431 aa)

Predicted Functional Partners:

ITSN2

0.627

ENSSARP00000000084

0.622

STX4

0.622

ENSSARP00000011666

0.622

ENSSARP00000001902

0.611

RIMS2

0.603

RABAC1

0.594

C3orf67

0.575

ENSSARP00000009844

0.566

ENSSARP00000000188

0.560

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3orf67	ENSSARP00000004871	ENSSARP00000005116	ENSSARP00000004871	Chromosome 3 open reading frame 67.	annotation not available	0.575
ENSSARP00000000084	ENSSARP00000004871	ENSSARP00000000084	ENSSARP00000004871	annotation not available	annotation not available	0.622
ENSSARP00000000084	RIMS2	ENSSARP00000000084	ENSSARP00000000212	annotation not available	Regulating synaptic membrane exocytosis 2.	0.702
ENSSARP00000000084	STX4	ENSSARP00000000084	ENSSARP00000003638	annotation not available	Syntaxin 4.	0.899
ENSSARP00000000188	ENSSARP00000004871	ENSSARP00000000188	ENSSARP00000004871	annotation not available	annotation not available	0.560
ENSSARP00000000188	ENSSARP00000009844	ENSSARP00000000188	ENSSARP00000009844	annotation not available	annotation not available	0.871
ENSSARP00000000188	ITSN2	ENSSARP00000000188	ENSSARP00000006456	annotation not available	Intersectin 2.	0.872
ENSSARP00000001902	ENSSARP00000004871	ENSSARP00000001902	ENSSARP00000004871	annotation not available	annotation not available	0.611
ENSSARP00000004871	C3orf67	ENSSARP00000004871	ENSSARP00000005116	annotation not available	Chromosome 3 open reading frame 67.	0.575
ENSSARP00000004871	ENSSARP00000000084	ENSSARP00000004871	ENSSARP00000000084	annotation not available	annotation not available	0.622
ENSSARP00000004871	ENSSARP00000000188	ENSSARP00000004871	ENSSARP00000000188	annotation not available	annotation not available	0.560
ENSSARP00000004871	ENSSARP00000001902	ENSSARP00000004871	ENSSARP00000001902	annotation not available	annotation not available	0.611
ENSSARP00000004871	ENSSARP00000009844	ENSSARP00000004871	ENSSARP00000009844	annotation not available	annotation not available	0.566
ENSSARP00000004871	ENSSARP00000011666	ENSSARP00000004871	ENSSARP00000011666	annotation not available	annotation not available	0.622
ENSSARP00000004871	ITSN2	ENSSARP00000004871	ENSSARP00000006456	annotation not available	Intersectin 2.	0.627
ENSSARP00000004871	RABAC1	ENSSARP00000004871	ENSSARP00000012937	annotation not available	Rab acceptor 1.	0.594
ENSSARP00000004871	RIMS2	ENSSARP00000004871	ENSSARP00000000212	annotation not available	Regulating synaptic membrane exocytosis 2.	0.603
ENSSARP00000004871	STX4	ENSSARP00000004871	ENSSARP00000003638	annotation not available	Syntaxin 4.	0.622
ENSSARP00000009844	ENSSARP00000000188	ENSSARP00000009844	ENSSARP00000000188	annotation not available	annotation not available	0.871
ENSSARP00000009844	ENSSARP00000004871	ENSSARP00000009844	ENSSARP00000004871	annotation not available	annotation not available	0.566