Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR17WD repeat domain 17. (1322 aa)    
Predicted Functional Partners:
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.975
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.968
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.964
RPF2
Ribosome production factor 2 homolog.
   
 
 0.948
ENSSARP00000003091
annotation not available
   
 
 0.928
PDCD11
Programmed cell death 11.
   
 
 0.921
GRWD1
Glutamate rich WD repeat containing 1.
   
  
 0.875
NOP58
NOP58 ribonucleoprotein.
   
   0.872
PUM3
Pumilio RNA binding family member 3.
   
 
 0.869
ENSSARP00000001124
annotation not available
   
 
 0.869
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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