STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR17WD repeat domain 17. (1322 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.910
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.905
ENSSARP00000003091
annotation not available
   
 
 0.902
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.894
GRWD1
Glutamate rich WD repeat containing 1.
   
  
0.893
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.883
DHX15
DEAH-box helicase 15.
   
 
 0.864
WDR3
WD repeat domain 3.
   
  
0.852
PDCD11
Programmed cell death 11.
   
 
 0.847
PUM3
Pumilio RNA binding family member 3.
   
 
 0.840
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.