STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GNMTGlycine N-methyltransferase. (295 aa)    
Predicted Functional Partners:
SHMT1
Serine hydroxymethyltransferase 1.
     
 0.936
DMGDH
Dimethylglycine dehydrogenase.
   
 
 0.934
ENSSARP00000003497
annotation not available
     
 0.928
PIPOX
Pipecolic acid and sarcosine oxidase.
   
 
 0.927
GATM
Glycine amidinotransferase.
     
 0.892
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 
 0.890
ENSSARP00000003947
annotation not available
   
 
 0.869
DAO
D-amino acid oxidase.
     
 0.857
ALAS2
5'-aminolevulinate synthase 2.
     
 0.850
ENSSARP00000003886
annotation not available
   
 
 0.825
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.