Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIGXPhosphatidylinositol glycan anchor biosynthesis class X. (200 aa)    
Predicted Functional Partners:
PIGV
Phosphatidylinositol glycan anchor biosynthesis class V.
    
 0.977
ENSSARP00000011053
annotation not available
  
 
 0.951
PIGB
Phosphatidylinositol glycan anchor biosynthesis class B.
     
 0.942
PIGW
Phosphatidylinositol glycan anchor biosynthesis class W.
    
 0.930
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.849
LARS1
leucyl-tRNA synthetase 1.
  
 
 0.814
KARS1
lysyl-tRNA synthetase 1.
  
 
 0.804
RARS1
arginyl-tRNA synthetase 1.
  
 
 0.788
MARS1
methionyl-tRNA synthetase 1.
  
 
 0.765
IARS1
isoleucyl-tRNA synthetase 1.
  
 
 0.756
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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