STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOC6THO complex 6. (261 aa)    
Predicted Functional Partners:
THOC5
THO complex 5.
   
 0.999
THOC1
THO complex 1.
    
 0.999
THOC2
THO complex 2.
    
 0.998
ENSSARP00000012552
annotation not available
    
 0.997
LOC101550213
THO complex subunit 7 homolog.
    
 0.997
DDX39B
DExD-box helicase 39B.
   
 0.994
ZC3H13
Zinc finger CCCH-type containing 13.
    
 0.959
CHTOP
Chromatin target of PRMT1.
     
 0.940
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.934
SARNP
SAP domain containing ribonucleoprotein.
     
 0.912
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.