STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGR1Prostaglandin reductase 1. (329 aa)    
Predicted Functional Partners:
FH
Fumarate hydratase.
   
  0.577
ENSSARP00000012720
annotation not available
  
  
 0.573
ACTL7A
Actin like 7A.
      
 0.566
HPGD
15-hydroxyprostaglandin dehydrogenase.
  
 
 0.556
ENSSARP00000009100
annotation not available
      
 0.545
METAP1D
Methionyl aminopeptidase type 1D, mitochondrial.
  
  
 0.539
ENSSARP00000006717
annotation not available
      
 0.537
ENSSARP00000009467
annotation not available
      
 0.537
SGPL1
Sphingosine-1-phosphate lyase 1.
   
 
 0.527
DENND2D
DENN domain containing 2D.
      
 0.517
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.