STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000005459annotation not available (192 aa)    
Predicted Functional Partners:
DDX46
DEAD-box helicase 46.
   
 0.969
SF3A1
Splicing factor 3a subunit 1.
   
 0.959
SF3A3
Splicing factor 3a subunit 3.
   
 0.923
CDC5L
Cell division cycle 5 like.
   
 
 0.915
SF3B1
Splicing factor 3b subunit 1.
   
 0.870
PRPF39
pre-mRNA processing factor 39.
   
 0.827
NCBP2
Nuclear cap binding protein subunit 2.
    
 0.824
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.819
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.781
RBM25
RNA binding motif protein 25.
   
 0.781
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.