STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000006818annotation not available (632 aa)    
Predicted Functional Partners:
ENSSARP00000002827
annotation not available
    
  0.758
ENSSARP00000009665
annotation not available
    
  0.758
TRAPPC12
Trafficking protein particle complex 12.
    
 
 0.665
ENSSARP00000001458
annotation not available
    
 0.593
ENSSARP00000006823
annotation not available
    
 0.580
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.578
ENSSARP00000011203
annotation not available
    
 0.568
ENSSARP00000000158
annotation not available
    
 
 0.557
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.549
SPOP
Speckle type BTB/POZ protein.
   
 0.541
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.