STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERMNErmin. (296 aa)    
Predicted Functional Partners:
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 0.990
RPL11
Ribosomal protein L11.
  
   0.898
CUL7
Cullin 7.
   
   0.897
ENSSARP00000000829
annotation not available
   
   0.897
RPL8
Ribosomal protein L8.
   
   0.897
ENSSARP00000004157
annotation not available
   
   0.896
MED1
Mediator complex subunit 1.
    
   0.896
ENSSARP00000001020
annotation not available
   
 
 0.894
TCF25
Transcription factor 25.
    
 0.874
RPS16
Ribosomal protein S16.
    
   0.868
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.