STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH20Cadherin 20. (719 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.869
JUP
Junction plakoglobin.
    
 0.863
CDH11
Cadherin 11.
   
 
0.814
CDH2
Cadherin 2.
  
 
0.812
CDH7
Cadherin 7.
  
 
0.812
CTNNA2
Catenin alpha 2.
    
 0.805
ENSSARP00000010294
annotation not available
     
0.805
CTNNA1
Catenin alpha 1.
    
 0.805
CDH6
Cadherin 6.
     
0.805
ENSSARP00000011359
annotation not available
     
0.804
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.