STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2AUbiquitin conjugating enzyme E2 A. (154 aa)    
Predicted Functional Partners:
ENSSARP00000007617
annotation not available
   
 0.994
ENSSARP00000004100
annotation not available
    
 0.962
RNF40
Ring finger protein 40.
    
 0.959
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.946
RNF20
Ring finger protein 20.
    
 0.941
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.928
ENSSARP00000006326
annotation not available
   
 0.904
ENSSARP00000003677
annotation not available
   
 0.899
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 0.886
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.870
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.