ENSSARP00000012106 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000012106

annotation not available (136 aa)

Predicted Functional Partners:

KDM6A

0.904

KDM6B

0.904

ENSSARP00000001853

0.897

ENSSARP00000008074

0.897

LOC101559105

0.897

HAT1

0.872

ENSSARP00000006011

0.832

ASF1A

0.822

ARID4A

0.813

ARID4B

0.813

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSSARP00000006346	ENSSARP00000010804	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.729
ARID4A	ASF1A	ENSSARP00000006346	ENSSARP00000004000	AT-rich interaction domain 4A.	Anti-silencing function 1A histone chaperone.	0.565
ARID4A	ENSSARP00000001853	ENSSARP00000006346	ENSSARP00000001853	AT-rich interaction domain 4A.	annotation not available	0.854
ARID4A	ENSSARP00000006011	ENSSARP00000006346	ENSSARP00000006011	AT-rich interaction domain 4A.	annotation not available	0.707
ARID4A	ENSSARP00000008074	ENSSARP00000006346	ENSSARP00000008074	AT-rich interaction domain 4A.	annotation not available	0.854
ARID4A	ENSSARP00000012106	ENSSARP00000006346	ENSSARP00000012106	AT-rich interaction domain 4A.	annotation not available	0.813
ARID4A	KDM6A	ENSSARP00000006346	ENSSARP00000003229	AT-rich interaction domain 4A.	Lysine demethylase 6A.	0.839
ARID4A	KDM6B	ENSSARP00000006346	ENSSARP00000005661	AT-rich interaction domain 4A.	Lysine demethylase 6B.	0.839
ARID4A	LOC101559105	ENSSARP00000006346	ENSSARP00000012117	AT-rich interaction domain 4A.	Histone H4.	0.854
ARID4B	ARID4A	ENSSARP00000010804	ENSSARP00000006346	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.729
ARID4B	ASF1A	ENSSARP00000010804	ENSSARP00000004000	AT-rich interaction domain 4B.	Anti-silencing function 1A histone chaperone.	0.565
ARID4B	ENSSARP00000001853	ENSSARP00000010804	ENSSARP00000001853	AT-rich interaction domain 4B.	annotation not available	0.854
ARID4B	ENSSARP00000006011	ENSSARP00000010804	ENSSARP00000006011	AT-rich interaction domain 4B.	annotation not available	0.753
ARID4B	ENSSARP00000008074	ENSSARP00000010804	ENSSARP00000008074	AT-rich interaction domain 4B.	annotation not available	0.854
ARID4B	ENSSARP00000012106	ENSSARP00000010804	ENSSARP00000012106	AT-rich interaction domain 4B.	annotation not available	0.813
ARID4B	KDM6A	ENSSARP00000010804	ENSSARP00000003229	AT-rich interaction domain 4B.	Lysine demethylase 6A.	0.867
ARID4B	KDM6B	ENSSARP00000010804	ENSSARP00000005661	AT-rich interaction domain 4B.	Lysine demethylase 6B.	0.859
ARID4B	LOC101559105	ENSSARP00000010804	ENSSARP00000012117	AT-rich interaction domain 4B.	Histone H4.	0.854
ASF1A	ARID4A	ENSSARP00000004000	ENSSARP00000006346	Anti-silencing function 1A histone chaperone.	AT-rich interaction domain 4A.	0.565
ASF1A	ARID4B	ENSSARP00000004000	ENSSARP00000010804	Anti-silencing function 1A histone chaperone.	AT-rich interaction domain 4B.	0.565