STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45308.1COG:COG0772: Bacterial cell division membrane protein [Cell division and chromosome partitioning]; Pfam:PF01098:Cell cycle protein FtsW/RodA; Pfam:PF01098:Cell cycle protein FtsW/RodA; Belongs to the SEDS family. (441 aa)    
Predicted Functional Partners:
AHY45307.1
COG:COG0768: Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis outer membrane]; Pfam:PF00905:Penicillin-binding protein, transpeptidase; Pfam:PF00905:Penicillin-binding protein, transpeptidase; SUPERFAMILY:SSF56601:Beta-lactamase/transpeptidase-like.
 
 0.998
AHY45309.1
Protein phosphatase 2C; COG:COG0631: Serine/threonine protein phosphatase [Signal transduction mechanisms]; Pfam:PF00481:Protein phosphatase 2C (PP2C)-like; SMART:SM00331:Protein phosphatase 2C (PP2C)-like; SUPERFAMILY:SSF81606:Protein phosphatase 2C (PP2C)-like.
  
 0.960
AHY45311.1
Protein of unknown function (DUF2662); COG:COG1716: FOG: FHA domain [Signal transduction mechanisms]; Pfam:PF12401:Protein of unknown function DUF3662; ProSiteProfiles:PS50006:Forkhead-associated (FHA) domain; SMART:SM00240:Forkhead-associated (FHA) domain; SUPERFAMILY:SSF49879:SMAD/FHA domain.
 
   
 0.958
AHY45310.1
FHA domain; COG:COG1716: FOG: FHA domain [Signal transduction mechanisms]; Pfam:PF00498:Forkhead-associated (FHA) domain; ProSiteProfiles:PS50006:Forkhead-associated (FHA) domain; SMART:SM00240:Forkhead-associated (FHA) domain; SUPERFAMILY:SSF49879:SMAD/FHA domain.
 
   
 0.954
AHY46788.1
COG:COG0768: Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis outer membrane]; Pfam:PF00905:Penicillin-binding protein, transpeptidase; Pfam:PF00905:Penicillin-binding protein, transpeptidase; SUPERFAMILY:SSF56601:Beta-lactamase/transpeptidase-like.
 
 0.936
murG
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.840
murC
murC: UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.800
AHY45306.1
Protein kinase domain; COG:COG0515: Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication recombination and repair]; Pfam:PF00069:Protein kinase, catalytic domain; ProSitePatterns:PS00107:Protein kinase, ATP binding site; ProSiteProfiles:PS51178:PASTA; SMART:SM00220:Serine/threonine- / dual specificity protein kinase, catalytic domain; SUPERFAMILY:SSF56112:Protein kinase-like domain.
 
 
 0.792
mraY
mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.769
AHY46414.1
TIGRFAM:TIGR03423:Penicillin-binding protein 2; COG:COG0768: Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis outer membrane]; Pfam:PF00905:Penicillin-binding protein, transpeptidase; SUPERFAMILY:SSF56601:Beta-lactamase/transpeptidase- like;UniPathway: UPA00219; pbp2_mrdA.
 
 0.753
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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