STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45341.1COG:COG0021: Transketolase [Carbohydrate transport and metabolism]; Pfam:PF00456:Transketolase, N-terminal; Pfam:PF00456:Transketolase, N-terminal; ProSitePatterns:PS00802:Transketolase binding site; SMART:SM00861:Transketolase-like, pyrimidine-binding domain; SUPERFAMILY:SSF52518:No Description. (618 aa)    
Predicted Functional Partners:
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
 0.999
AHY46652.1
TIGRFAM:TIGR01163:Ribulose-phosphate 3-epimerase-like; COG:COG0036: Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Pfam:PF00834:Ribulose-phosphate 3-epimerase-like; PIRSF:PIRSF001461:Ribulose-phosphate 3-epimerase; ProSitePatterns:PS01086:Ribulose-phosphate 3-epimerase-like; SUPERFAMILY:SSF51366:Ribulose-phosphate binding barrel.
 0.996
AHY46083.1
TIGRFAM:TIGR01064:Pyruvate kinase; COG:COG0469: Pyruvate kinase [Carbohydrate transport and metabolism]; Pfam:PF00224:Pyruvate kinase, barrel; PRINTS:PR01050:Pyruvate kinase; ProSitePatterns:PS00110:Pyruvate kinase, active site; SUPERFAMILY:SSF51621:Pyruvate/Phosphoenolpyruvate kinase-like domain;KEGG: 00010; KEGG: 00230; KEGG: 00620; KEGG: 00710; MetaCyc: PWY-2221; Reactome: REACT_474; UniPathway: UPA00109; pyruv_kin.
  
 0.952
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 
 0.951
AHY46395.1
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
  
 
 0.945
AHY47740.1
TIGRFAM:TIGR00167:Ketose-bisphosphate aldolase, class-II; COG:COG0191: Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]; Pfam:PF01116:Ketose-bisphosphate aldolase, class-II; PIRSF:PIRSF001359:Ketose-bisphosphate aldolase, class-II; SUPERFAMILY:SSF51569:No Description.
  
 
 0.945
AHY46881.1
COG:COG1494: Fructose-16-bisphosphatase/sedoheptulose 17-bisphosphatase and related proteins [Carbohydrate transport and metabolism]; Pfam:PF03320:Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; Pfam:PF03320:Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; PIRSF:PIRSF004532:Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase; SUPERFAMILY:SSF56655:No Description; Belongs to the FBPase class 2 family.
   
 0.943
rpiA
rpiA: ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 0.936
deoC
deoC: deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
 0.932
AHY45693.1
COG:COG3588: Fructose-16-bisphosphate aldolase [Carbohydrate transport and metabolism]; Pfam:PF00274:Fructose-bisphosphate aldolase, class-I; Pfam:PF00274:Fructose-bisphosphate aldolase, class-I; SUPERFAMILY:SSF51569:No Description.
  
 0.931
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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