STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45344.1TIGRFAM:TIGR00872:6-phosphogluconate dehydrogenase-related protein; COG:COG1023: Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]; Pfam:PF03446:6-phosphogluconate dehydrogenase, NADP-binding; PIRSF:PIRSF000103:Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type; PRINTS:PR00076:6-phosphogluconate dehydrogenase signature; ProSitePatterns:PS00895:3-hydroxyisobutyrate dehydrogenase-related, conserved site; SUPERFAMILY:SSF51735:No Description;KEGG: 00051; KEGG: 00053; KEGG: 00140; KEGG: 00253; KEGG: 00260; KEGG: 00362; KEGG: 00363; KEGG: 00520; KEG [...] (305 aa)    
Predicted Functional Partners:
zwf
Zwf: glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 0.993
pgl
Pgl: 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
  
 0.992
zwf-2
Zwf: glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 0.977
AHY46899.1
COG:COG1070: Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]; Pfam:PF02782:Carbohydrate kinase, FGGY, C-terminal; Pfam:PF02782:Carbohydrate kinase, FGGY, C-terminal; ProSitePatterns:PS00445:Carbohydrate kinase, FGGY, conserved site; SUPERFAMILY:SSF53067:No Description; Belongs to the FGGY kinase family.
  
 
 0.916
rpiA
rpiA: ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.914
AHY46652.1
TIGRFAM:TIGR01163:Ribulose-phosphate 3-epimerase-like; COG:COG0036: Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]; Pfam:PF00834:Ribulose-phosphate 3-epimerase-like; PIRSF:PIRSF001461:Ribulose-phosphate 3-epimerase; ProSitePatterns:PS01086:Ribulose-phosphate 3-epimerase-like; SUPERFAMILY:SSF51366:Ribulose-phosphate binding barrel.
    
 0.907
AHY45346.1
COG:COG3429: Glucose-6-P dehydrogenase subunit [Carbohydrate transport and metabolism]; Pfam:PF10128:Glucose-6-phosphate dehydrogenase assembly protein OpcA; Pfam:PF10128:Glucose-6-phosphate dehydrogenase assembly protein OpcA.
     
 0.798
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
  
 0.708
AHY47098.1
gntP: transporter, gluconate:H+ symporter (GntP) family; TIGRFAM:TIGR00791:Gluconate transporter; COG:COG2610: H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]; Pfam:PF02447:Gluconate transporter; PIRSF:PIRSF002746:Gluconate transporter.
 
  
 0.591
AHY45348.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.515
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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