STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglPgl: 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (249 aa)    
Predicted Functional Partners:
zwf
Zwf: glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 0.999
zwf-2
Zwf: glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 0.999
AHY45344.1
TIGRFAM:TIGR00872:6-phosphogluconate dehydrogenase-related protein; COG:COG1023: Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]; Pfam:PF03446:6-phosphogluconate dehydrogenase, NADP-binding; PIRSF:PIRSF000103:Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type; PRINTS:PR00076:6-phosphogluconate dehydrogenase signature; ProSitePatterns:PS00895:3-hydroxyisobutyrate dehydrogenase-related, conserved site; SUPERFAMILY:SSF51735:No Description;KEGG: 00051; KEGG: 00053; KEGG: 00140; KEGG: 00253; KEGG: 00260; KEGG: 00362; KEGG: 00363; KEGG: 00520; KEG [...]
 
  
 0.992
AHY45346.1
COG:COG3429: Glucose-6-P dehydrogenase subunit [Carbohydrate transport and metabolism]; Pfam:PF10128:Glucose-6-phosphate dehydrogenase assembly protein OpcA; Pfam:PF10128:Glucose-6-phosphate dehydrogenase assembly protein OpcA.
 
  
 0.920
AHY46899.1
COG:COG1070: Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]; Pfam:PF02782:Carbohydrate kinase, FGGY, C-terminal; Pfam:PF02782:Carbohydrate kinase, FGGY, C-terminal; ProSitePatterns:PS00445:Carbohydrate kinase, FGGY, conserved site; SUPERFAMILY:SSF53067:No Description; Belongs to the FGGY kinase family.
   
 0.916
AHY47192.1
COG:COG4122: Predicted O-methyltransferase [General function prediction only]; Pfam:PF01596:O-methyltransferase, family 3; Pfam:PF01596:O-methyltransferase, family 3; SUPERFAMILY:SSF53335:No Description.
      0.894
AHY47502.1
TIGRFAM:TIGR00221:N-acetylglucosamine-6-phosphate deacetylase; COG:COG1820: N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]; Pfam:PF13147:Amidohydrolase; PIRSF:PIRSF038994:N-acetylglucosamine-6-phosphate deacetylase; SUPERFAMILY:SSF51556:No Description;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6517.
  
 
 0.861
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
 
 0.814
hemC
hemC: porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
    
 0.694
AHY46338.1
TIGRFAM:TIGR00594:DNA polymerase III, alpha subunit; COG:COG0587: DNA polymerase III alpha subunit [DNA replication recombination and repair]; Pfam:PF07733:Bacterial DNA polymerase III, alpha subunit; SMART:SM00481:Polymerase/histidinol phosphatase, N-terminal; SUPERFAMILY:SSF89550:Polymerase/histidinol phosphatase-like;KEGG: 00230; KEGG: 00240.
  
    0.595
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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