STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45349.1COG:COG0665: Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]; Pfam:PF01266:FAD dependent oxidoreductase; Pfam:PF01266:FAD dependent oxidoreductase; SUPERFAMILY:SSF51905:No Description. (358 aa)    
Predicted Functional Partners:
thiG
thiS: thiamine biosynthesis protein ThiS; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.673
AHY45911.1
FAD dependent oxidoreductase; COG:COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]; Pfam:PF01266:FAD dependent oxidoreductase; SUPERFAMILY:SSF103025:No Description; Belongs to the GcvT family.
 
 
0.563
AHY45607.1
COG:COG0446: Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; PRINTS:PR00368:FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SUPERFAMILY:SSF51905:No Description.
  
 
 0.502
AHY47328.1
Pyridine nucleotide-disulfide oxidoreductase; COG:COG0446: Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; PRINTS:PR00368:FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SUPERFAMILY:SSF51905:No Description.
  
 
 0.502
AHY45348.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.494
AHY45912.1
COG:COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]; Pfam:PF01571:Glycine cleavage T-protein, N-terminal; Pfam:PF01571:Glycine cleavage T-protein, N-terminal; PIRSF:PIRSF006487:Glycine cleavage system T protein; SUPERFAMILY:SSF103025:No Description; Belongs to the GcvT family.
 
 
 0.487
AHY45351.1
COG:COG0160: 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]; Pfam:PF00202:Aminotransferase class-III; Pfam:PF00202:Aminotransferase class-III; PIRSF:PIRSF000521:No Description; ProSitePatterns:PS00600:Aminotransferase class-III; SUPERFAMILY:SSF53383:Pyridoxal phosphate-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.471
AHY47164.1
COG:COG2423: Predicted ornithine cyclodeaminase mu-crystallin homolog [Amino acid transport and metabolism]; Pfam:PF02423:Ornithine cyclodeaminase/mu-crystallin; Pfam:PF02423:Ornithine cyclodeaminase/mu-crystallin; PIRSF:PIRSF001439:Ornithine cyclodeaminase/mu-crystallin; SUPERFAMILY:SSF51735:No Description.
 
  
 0.433
AHY45353.1
NCS1 nucleoside transporter family; TIGRFAM:TIGR00800:Nucleobase cation symporter-1, NCS1; COG:COG1953: Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism]; Pfam:PF02133:Permease, cytosine/purines, uracil, thiamine, allantoin.
 
    0.430
AHY45352.1
TIGRFAM:TIGR01879:Amidase, hydantoinase/carbamoylase; COG:COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]; Pfam:PF01546:Peptidase M20; PIRSF:PIRSF001235:Amidase, hydantoinase/carbamoylase; SUPERFAMILY:SSF53187:No Description.
  
    0.419
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (24%) [HD]
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