STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45351.1COG:COG0160: 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]; Pfam:PF00202:Aminotransferase class-III; Pfam:PF00202:Aminotransferase class-III; PIRSF:PIRSF000521:No Description; ProSitePatterns:PS00600:Aminotransferase class-III; SUPERFAMILY:SSF53383:Pyridoxal phosphate-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa)    
Predicted Functional Partners:
AHY45918.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase.
 
 0.926
AHY46946.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; ProSitePatterns:PS00070:Aldehyde dehydrogenase, conserved site; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase.
 
 0.926
AHY47657.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; ProSitePatterns:PS00687:Aldehyde dehydrogenase, conserved site; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.926
AHY48015.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase.
 
 0.926
AHY45633.1
GABAtrnsam: 4-aminobutyrate transaminase; TIGRFAM:TIGR00700:4-aminobutyrate aminotransferase, bacterial; COG:COG0160: 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]; Pfam:PF00202:Aminotransferase class-III; PIRSF:PIRSF000521:No Description; ProSitePatterns:PS00600:Aminotransferase class-III; SUPERFAMILY:SSF53383:Pyridoxal phosphate-dependent transferase;KEGG: 00250; KEGG: 00280; KEGG: 00410; KEGG: 00640; KEGG: 00650; MetaCyc: PWY-4321; UniPathway: UPA00733; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.922
panC
panC: pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.902
AHY47357.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; ProSitePatterns:PS00687:Aldehyde dehydrogenase, conserved site; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.852
AHY45352.1
TIGRFAM:TIGR01879:Amidase, hydantoinase/carbamoylase; COG:COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]; Pfam:PF01546:Peptidase M20; PIRSF:PIRSF001235:Amidase, hydantoinase/carbamoylase; SUPERFAMILY:SSF53187:No Description.
  
 
 0.794
AHY45353.1
NCS1 nucleoside transporter family; TIGRFAM:TIGR00800:Nucleobase cation symporter-1, NCS1; COG:COG1953: Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism]; Pfam:PF02133:Permease, cytosine/purines, uracil, thiamine, allantoin.
 
    0.784
AHY45350.1
TIGRFAM:TIGR02033:Hydantoinase/dihydropyrimidinase; COG:COG0044: Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]; Pfam:PF13147:Amidohydrolase; SUPERFAMILY:SSF51556:No Description;Reactome: REACT_18266.
 
  
 0.759
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
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